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Publications

2017
Ogłuszka, Magdalena; Szostak, Agnieszka; te Pas, Marinus F. W., Poławska, Ewa; Urbański, Paweł; Blicharski, Tadeusz; Pareek, Chandra; Juszczuk-Kubiak, Edyta; Dunkelberger, Jenelle; Horbańczuk, Jarosław; Pierzchała, Mariusz (2017). A porcine gluteus medius muscle genome-wide transcriptome analysis: dietary effects of omega-6 and omega-3 fatty acids on biological mechanisms. Gene & Nutrition. 12:4. doi: 10.1186/s12263-017-0552-8. KBN 30 POINTS. IF: 2.398.
Fraser L., Zasiadczyk L., Pareek CS. (2017). Effects of boar variability on comet-detected sperm DNA damage following cryopreservation. Animal Production Science. DOI: 10.1071/AN16274. KBN: 30 POINTS. IF: 1.87
Fraser L., Byrm P., Pareek C.S. (2017). Isolation of total ribonucleic acid from fresh and frozen-thawed boar semen and its relevance in transcriptome studies. South African Journal of Animal Science 2017, 47: (No. 1). http://dx.doi.org/10.4314/sajas.v47i1.9 KBN 20 POINTS. IF: 0.74
Pareek CS, Błaszczyk P, Dziuba P, Czarnik U, Fraser L, Sobiech P, Pierzchała M, Feng Y, Kadarmideen HN, Kumar D. (2017). Single nucleotide polymorphism discovery in bovine liver using RNA-seq technology. PLoS ONE 12(2): e0172687. doi:10.1371/journal.pone.0172687. KBN 40 POINTS. IF: 3.54
Fraser L., Strzezek J., Wasilewska K., Pareek C.S. (2017). Sperm DNA damage in relation to lipid peroxidation following freezing-thawing of boar semen. South African Journal Of Animal Science, 47: (No. 2). 213-218. KBN 20 POINTS. IF: 0.74
2016
Szostak A, Ogłuszka M, te Pas MFW, Poławska E, Urbański P, Juszczuk-Kubiak E, Blicharski T, Pareek CS, Dunkelberger J, Horbańczuk J, Pierzchała M. (2016). Effect of a diet enriched with omega-6 and omega-3 fatty acids on the pig liver transcriptome. Genes & Nutrition, 11: 9. KBN 30 Points. IF: 2.398.
Chandra Shekhar Pareek, Rafał Smoczyński, Haja N. Kadarmideen, Piotr Dziuba, Paweł Błaszczyk, Marcin Sikora, Paulina Walendzik, Tomasz Grzybowski, Mariusz Pierzchała, Jarosław Horbańczuk, Agnieszka Szostak, Magdalena Ogluszka, Lech Zwierzchowski, Urszula Czarnik, Leyland Fraser, Przemysław Sobiech, Krzysztof Wąsowicz, Brian Gelfand, Yaping Feng, Dibyendu Kumar. (2016). Single nucleotide polymorphism discovery in bovine pituitary gland using RNA-seq technology. PloS one 11 (9), e0161370. KBN: 40 points. IF 3.54.
2015
Urszula Czarnik, Janusz Strychalski, Kamil Oleński, Marta Barcewicz, Dorota Maria Hering, Paulina Puckowska, Mariusz Pierzchała, Paweł Urbański, Chandra Shekhar Pareek (2015). The effect of insertion/deletion polymorphisms within the promoter and intron 1 sequences of the PRNP gene on the breeding value of Holstein-Friesian bulls. Animal Science Papers and Reports vol. 33 (2015) no. 1, 13-22.
Pareek C.S. (2015). Transcriptome analysis on RNA-seq data. Journal of Next Generation Sequencing & Applications. S1: 002.
2014
Pareek, C.S. (2014). An overview of next generation genome sequencing platforms. In Next Generation Sequencing: Current Technologies and Applications (Edited by Xu, J.). Caister Academic Press. Chapter 1. pp: 1-24. ISBN: 978-1-908230-33-1. Click here to publisher
2013
Pareek C.S., Tretyn A. (2013). Genome Function, ChIP-seq and personalized diagnotics. Book Chapter 6, pp: 78-96. eBook “Next-Generation Sequencing & Molecular Diagnostics”, Edited by prof. Dimitrios H. Roukos. Published by Future Science Group (FSG), London, N3 1QB, UK. DOI:10.2217/EBO.12.225.Click here to publisher
Pareek C.S., Michno J., Smoczynski R., Tyburski J., Gołębiewski M., Piechocki K., Średzińska M., Pierzchała M., Czarnik U., Ponsuksili S., Wimmers K. (2013). Identification of predicted genes expressed differentially in pituitary gland tissue of young growing bulls revealed by cDNA-AFLP technique. Czech J. Anim. Sci., 58: 147–158. KBN point: 25; Impact factor: 1.19;
2012
Pareek C.S., Pierzchala M., Michno J., Szymanska S., Smoczynski R., Jasik N., Gołębiewski M., Tyburski J., Urbanski P., Goluch D., Oprządek J., Zwierzchowski L., Siriluck P., Wimmers K. (2012). Gene expression profiling by cDNA-AFLP and identification of differentially expressed transcripts of bovine pituitary gland in growing bulls of dairy breeds. Animal Science Papers and Reports vol. 30 (2): 103-119. KBN point: 20; Impact factor: 0,553;
Pierzchała M., Pareek, C.S., Urbanski P., Goluch D., Kameczyk M., Rozycki M., Smoczynski R. Horbanczuk J.O. and Kuryl J. (2012). Study of the differential transcription in liver of growth hormone receptor (GHR), insulin-like growth factors (IGF1, IGF2) and insulin-like growth factor receptor (IGF1R) genes at different postnatal developmental ages in pig breeds. Molecular Biology Reports, 39: 3055-3066. KBN point: 20; Impact factor: 2.929;
Szymańska S., Studzinska S., Pareek C.S., Buszewski B. (2012). Techniki sekwencjonowania jako nowej generacji analityka w omice. Analityka: nauka i praktyka, 3: 27-36. KBN 3 Pkt.
2011
Czarnik U., Strychalski J., Zabolewicz T., Pareek C.S. (2011). Population-wide investigation of two Indel polymorphisms at the prion protein gene in Polish Holstein Friesian cattle. Biochemical Genetics, 49(5-6):303-12. Click here to pubmed KBN point: 13; Impact factor: 0.878;
Strychalski, J., Czarnik, U., Pierzchała, M., Pareek C.S. (2011). Relationship between the insertion/deletion polymorphism within the promoter and the intron 1 sequence of the PRNP gene and milk performance traits in cattle. Czech J. Anim. Sci., 56, no. 4: 151-156. Click here to publisher KBN point: 25; Impact factor: 1.19;
Pierzchała M., Pareek, C.S., Lisowski P., Urbanski P., Goluch D., Kameczyk M., Rozycki M., Cooper R.G. and Kuryl J. (2011). Evaluation based selection of reference genes for porcine hepatic tissue. Animal Science Paper and Report. 29: 53-63. Click here to publisher KBN point: 20; Impact factor: 0,553;
T. Zabolewicz, U. Czarnik, J. Strychalski, C.S. Pareek, M. Pierzchała (2011). The association between microsatellite Bm6438 and milk performance traits in Polish Holstein-Friesian cattle. Czech J. Anim. Sci., 56, 2011 (3): 107–113. Click here to publisher KBN point: 25; Impact factor: 1.19;
Pareek C.S., Smoczynski R. Tretyn A. (2011). Sequencing technologies and genome sequencing. Journal of Applied Genetics. 52: 413-435.Click here to Pub Med Central KBN point: 20; Impact factor: 1.847;
Pareek CS, Smoczynski R, Pierzchala M, Czarnik U, Tretyn A. (2011). From genotype to phenotype in bovine functional genomics. Briefings in Functional Genomics, 2011 10: 165-171. Click here to pubmed "KBN point" 32, "Impact factor" 4.126.
Pierzchała M., Pareek, C.S., Lisowski P., Urbanski P., Goluch D., Czarnik U., Kameczyk M., Rozycki M., Cooper R.G. and Kuryl J. (2011). Expression profile of porcine MYF5 and MYF6 genes in skeletal muscles of young growing pigs from different breeds at different developmental ages, based on the most stable reference genes. Animal Science Papers and Reports, 29: 231-246. Click here to publisher KBN point: 20; Impact factor: 0,553;
2010
Pareek C.S. (2010). Emerging Trends for Detection of Quantitative Trait Loci (QTL) and Whole Genome Scanning Procedures in Farm Animals. Book chapter, In: Advances in applied biotechnology: 25-38. [ISBN: 978-81-7754-354-4]. http://www.vedamsbooks.com/no62943.htm KBN point 7.
Pareek, C.S. (2010). Emerging Trends on Functional Genomics in Farm Animals. Book chapter, In: Advances in applied biotechnology: 141-148. [ISBN: 978-81-7754-354-4]. http://www.vedamsbooks.com/no62943.htm KBN point 7.
2009
Zdunczyk Z. and Pareek,C.S., (2009). Application of nutrigenomics tools in animal nutrition and feed sciences. Journal of animal nutrition and feed sciences, 18: 3-16.
2008
Pareek, C.S., Czarnik, U., Pierzchała, M., Zwierzchowski L. (2008). An association between the C>T single nucleotide polymorphism within intron IV of osteopontin encoding gene (SPP1) and body weight of growing Polish Holstein-Friesian cattle. Animal Science Papers and Reports, 26 (4): 251-257.
Lisowski, P., Pierzchala, M., Goscik, J., Pareek, C.S., Zwierzchowski L. (2008). Evaluation of reference genes for studies of gene expression in the bovine liver, kidney, pituitary, and thyroid. Journal of Applied Genetics, 49 (4): 367-372.
Pareek C.S. Zięba, M., Michno, J., Czarnik U., Zwierzchowski, L. (2008). Study of SNP C>T polymorphism within the candidate genes for dairy and beef traits in a panel of selected cattle breeds. Journal of Agro-biology, 25: 121-124
Fraser, L., Pareek, C.S. and Strzezek, J. (2008). Identification of amplied fragment length polymorphism markers associated with freezability of boar semen. – A pilot study. Medycyna Weterynaryjna, 64: 645-649.
2007
Sreder T., Flisikowski K., Maj. A., Zwierzchowski L., and Pareek C.S. (2007). A novel nucleotide sequence polymorphism in the 5-non-coding region of bovine estrogen receptor alpha gene, The RFLP-SnaBI. Biochemical Genetics 45: 255-262.
Czarnik, U., Galiński, M., Zabolewicz, T., Pareek C. S. (2007). Study of an association between SNP 775 C>T within the bovine ITBG2 gene and milk production traits in Black-and-White cows. Czech J. of Animal Science, 52: 1-6.
Czarnik, U., Galiński, M., Pareek C. S., Zabolewicz, T., Wielgosz-Groth Z. (2007). Study of SNP 775 C>T polymorphism within the bovine ITGB2 gene in Polish Black-and-White cattle and in local breeds of cattle. Czech J. of Animal Science, 52: 57-61
2006
Pierzchała M., Pareek C.S., Kurył J. (2006). Use of Modern Genetics Achievements for Improvement of Pork Quality. Polish J. of Food and Nutrition Sciences, 15/56: 369–377.
Walawski K., Wojciechowski, R., Czarnik U., Zabolewicz T., Pareek C. S. (2006). Detection of lethal effects linked with the PRNP locus. Bulletin of Veterinary Institute in Pulawy, 50: 23-28.
Czarnik U., Zabolewicz T., Pareek C. S., Ziemiński R., Walawski K. (2006). Evaluation of putative relationship between PRNP octapeptide repeat polymorphism and variability of milk production traits in cattle. Annals of Animal Science, 6: 29-36.
Pareek C.S. and Życzko K. (2006). Polymorphism of gene encoding C-reactive protein in suckling piglets. Annals of Animal science, 2/1: 41-45.
Pareek C.S. and Życzko K. (2006). B3GALT3 Gene Polymorphism and Susceptibility of Suckling Piglets to Diarrhea Caused by Escherichia coli. Animal science papers and reports: 24: 213-220.
2005
Pareek C.S., Pareek R.S., Zabolewicz T. Czarnik U and Walawski K. (2005). Study of DGAT1 K232A quantitative trait nucleotide polymorphism affecting milk production traits in Polish Black-and-White cattle. Journal of Applied Genetics, 46: 85-87.
Maj. A., Pareek, C.S. and Zwierzchowski L. (2005). Detection of new polymorphism for bovine growth hormone receptor gene in Bos Taurus and Bos Indicus. Journal of Animal Breeding and Genetics, 122: 414-417.
Flisikowski K.,Maj. A., Zwierzchowski L., Adamowicz T., Świtońki M., Heindleder S. and Pareek C.S. (2005). Nucleotide sequence and variation of IGF2 gene exon 6 in Bos taurus and Bos indicus cattle. Animal Biotechnology, 16: 203-208.
Czarnik U., Walawski K., Zabolewicz T., Pareek C. S. (2005): Preliminary evaluation BM6438 polymorphism as a putative candidate marker for milk performance traits associated with new breeding conception in Polish Black-and-White cattle. Annals of Animal Science, 5: 243-251.
[51]. Pareek, C.S. (2005). Rozprawa habilitacja: Genome-wide screening of 184 Bos taurus microsatellite markers and quantitative trait loci analysis of two candidate genes for milk production traits. Rozprawy i monografie Nr. 111, Wydawnictwo UWM, Olsztyn. 1-92.
2004
Czarnik U., Zabolewicz T., Galinski M., Pareek C.S., Walawski K. (2004). Silent point mutation polymorphism of the bovine CD18 encoding gene, Journal of Applied Genetics, 45: 73 – 76.
[47]. Walawski K., Pareek C.S., Czarnik U., Zabolewicz T., (2004). Identyfikacji loci cech ilościowych (QTLs), użytkowości mlecznej bydła przy pomocy skanowania genomu zgodnie z procedurą „Selektywnego łączenia DNA”. Rozdział w książce: Postępy genetyki molekularnej bydła i trzody chlewnej pod redakcją M. Świtońskiego, Poznań, 2004, [ISBN: 83-7160-364-9].
2003
Walawski, K., Ziemiański, R., Novokszonov A., Czarnik, U., Zabolewicz, T. and Pareek, C.S. (2003). Association between milk protein polymorphism and variability of milk performance traits in Polish Black-and-White cows population maintenance in herds of different levels of milk productivity. Annals of Animals Science, 3: 243-253.
Prusinowska I., Pareek C.S. and Walawski K. (2003). Relationship between immuno-relevant lysozyme gene polymorphism and differentiation of serum lysozyme activity in cattle. Bulletin of Veterinary Institute in Pulawy, 47: 523-531.
Schwerin M., Czernek-Schäfer D., Goldammer T., Kata S.R., Womack J.E., Pareek R., Pareek C., Walawski K. and Brunner R.M. (2003). Application of disease-associated differentially expressed genes - Mining for functional candidate genes for mastitis resistance in cattle. Genetics, Selection, Evolution, 35: 19-34.
Pareek C.S., Seyfert H.-M., Walawski K., and Schwerin M. (2003). The 5´-promoter and coding region of the macrophage expressed lysozyme encoding-gene do not reveal variants associated with high serum lytic activity in Polish Black and White Cattle. Journal of Animal breeding and Genetics, 120: 132-136.
Walawski, K., Czarnik, U., Wojciechowski, R. and Pareek, C.S. (2003). Praktyczne aspekty badań polimorfizmu białka prionowego u bydła. (In Polish) Zeszyty Naukowe Przeglądu Hodowlanego, 67: 43-51
Walawski K., Czarnik U., Wojciechowski R., Pareek C. S., (2003). Abnormal segregation of prion protein octapeptide – repeat alleles in cattle, Journal of Applied Genetics, 44: 375 –378
[46]. Walawski, K., Pareek, C.S., Czarnik, U., Zabolewicz, T. Prusinowska I. (2003). Badania struktury i ekspresji genu lizozymu u bydła. Badania Naukowe – Przegląd osiągnięć. Wydawnictwo Uniwersytetu Warmińsko-Mazurskiego w Olsztynie, pp: 14-18.
2002
Pareek C.S., Pareek, R.S. and Walawski, K. (2002). Novel linkage mapping approach using DNA pooling in human and animal genetics I. Detection of complex disease loci. Journal of Applied Genetics, 43: 175-192.
Pareek, C.S., Pareek, R.S. and Walawski, K. (2002). Novel linkage mapping approach using selective DNA pooling in human and animal genetics. II. Detection of quantitative traits loci in dairy cattle. Journal of Applied Genetics, 43: 309-318.
Walawski K. Pareek C.S., Pareek R.S., Zabolewicz T. and Czarnik U. (2002) Identification of QTLs for milk performance traits in cattle, by genome scanning and genetic linkage analysis according to the “Selective DNA pooling” procedure. Biuletyn informacyjne IŻ R XI (2002): 2: 75-90.
Zabolewicz T., Pareek C.S., Galinski M., and Walawski K. (2002). Genetic structure of macrophage expressed lysozyme gene polymorphism in Polish Back-and-White cattle population. Annals of Animals Science, 15: 49-54.
Pareek, R.S., Pareek, C.S. and Walawski K. (2002). Identification of candidate genes for mastitis resistance in the bovine chromosome 18. Roczniki Nauk Zootechnicznych, 15: 37-42.
2000
Walawski, K., Czarnik, U. and Pareek, C.S. (2000). The current state of the studies on utilization of lysozyme gene polymorphism in cattle breeding. Zeszyty Naukowe Przeglądu Hodowlanego, 54: 103-109.
Pareek. C.S. (2000). selective DNA pooling approach for identifying and mapping QTL genes in dairy cattle. Acta Fytotechnica et Zootechnica, 3: 13.
1999
Pareek, C.S., Schwerin, M., Seyfert, H-M. and Walawski K. (1999). Preliminary evaluation of blood and milk diagnostic indices in relation to mLys-mic genotype in half-sib cows reared from experimental herd of black and white cattle. Archives of Animal Breeding, 42: 109-111
Walawski K., Pareek C.S., Czarnik U. and Zabalowicz T. (1999). High lysozyme activity families in Polish black and white cattle. Acta Theriologica, 44: 91-100.
[50]. Pareek, C.S. (1999). Rozprawa doktorska: “Association between lysozyme gene polymorphism and differentiation of natural resistance diagnostic indices in young cattle” ART, Olsztyn, Poland. pp: 1-89.
1998
Pareek C.S., Seyfert H-M., Walawski K., Czarnik U., Guiard V., Grupe S. and Schwerin M. (1998). Co-segregation of alleles at a micro-satellite locus within the macrophage expressed lysozyme gene variants and levels of serum lysozyme activity in two half-sib families of Polish black and white cattle. Animal Genetics, 29: 441-445
Walawski K., Pareek C. S., Czarnik U. 1998: Badania nad polimorfizmem i ekspresją genu lizozymu u bydła. (In Polish) Przyszłość hodowli a dobrostan zwierząt, 4: 160-161.
Pareek, C.S., Schwerin, M., and Walawski, K. (1998). Genetic association of lys-mic microsatellite marker with serum lysozyme activity in Polish black and white cattle. Czech Journal of Animal Science, 43: 400-401.
Walawski, K., Pareek, C.S. and Czarnik, U. (1998). Genetic aspects of lysozyme differentiation in black and white cattle reared in the north region of Poland. Czech Journal of Animal Science, 43: 399.
1996
Pareek, C.S. and Kaminski, K. (1996). Bovine leukocyte adhesion deficiency (BLAD) and its worldwide prevalence. Journal of Applied Genetics, 37 (3): 299-311.